DNAseqtest - Generating and Testing DNA Sequences
Generates DNA sequences based on Markov model techniques
for matched sequences. This can be generalized to several
sequences. The sequences (taxa) are then arranged in an
evolutionary tree (phylogenetic tree) depicting how taxa
diverge from their common ancestors. This gives the tests and
estimation methods for the parameters of different models.
Standard phylogenetic methods assume stationarity, homogeneity
and reversibility for the Markov processes, and often impose
further restrictions on the parameters.