Package: DNAseqtest 1.0

DNAseqtest: Generating and Testing DNA Sequences

Generates DNA sequences based on Markov model techniques for matched sequences. This can be generalized to several sequences. The sequences (taxa) are then arranged in an evolutionary tree (phylogenetic tree) depicting how taxa diverge from their common ancestors. This gives the tests and estimation methods for the parameters of different models. Standard phylogenetic methods assume stationarity, homogeneity and reversibility for the Markov processes, and often impose further restrictions on the parameters.

Authors:Faisal Ababneh, John Robinson, Lars S Jermiin and Hasinur Rahaman Khan

DNAseqtest_1.0.tar.gz
DNAseqtest_1.0.zip(r-4.5)DNAseqtest_1.0.zip(r-4.4)DNAseqtest_1.0.zip(r-4.3)
DNAseqtest_1.0.tgz(r-4.4-any)DNAseqtest_1.0.tgz(r-4.3-any)
DNAseqtest_1.0.tar.gz(r-4.5-noble)DNAseqtest_1.0.tar.gz(r-4.4-noble)
DNAseqtest_1.0.tgz(r-4.4-emscripten)DNAseqtest_1.0.tgz(r-4.3-emscripten)
DNAseqtest.pdf |DNAseqtest.html✨
DNAseqtest/json (API)

Peer review:

On CRAN:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

14 exports 0.00 score 0 dependencies 14 scripts 140 downloads

Last updated 8 years agofrom:3717375c50. Checks:OK: 7. Indexed: yes.

Exports:artomatDistanceFmatrixgngn2gn3simlikelihoodNtmlPtsimappsimembSmatrixTEST2TEST3

Dependencies: